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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11138296_11138394_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11138296 - 11138394

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

CACAAACGTACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GCTACCACGACC

Flanking Amino Acid:

SDSDEEKSRRANPSKTIDLG

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

55.7

0.13

1.1

46.3

39.9

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

46.4

-0.3

1.9

57.05

41.3

Associated Gene:

Gene:

CLINT1

Ensembl Gene ID:

ENSAPLG00000013481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044696

11102903 - 11149797

46895