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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11139561_11143851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11139561 - 11143851

Intron Length:

4291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

AGGCCTTTAACG

Flanking Amino Acid:

FDGVSQPASTGGSTDPFGGF

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

77.3

0.68

79.3

29.4

Major PPT

77.4

0.62

0.8

69.5

36.8

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

63.1

0.27

1.4

60.08

41.6

Associated Gene:

Gene:

CLINT1

Ensembl Gene ID:

ENSAPLG00000013481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044696

11102903 - 11149797

46895

ENSAPLT00000028391

11102903 - 11149797

46895

ENSAPLT00000022606

11113969 - 11149797

35829

ENSAPLT00000014098

11102903 - 11150220

47318