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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11143930_11147816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11143930 - 11147816

Intron Length:

3887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CTACCTTTTATT

Flanking Amino Acid:

AATASFPSSQGTATSGNGDF

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.5

0.64

0.9

74.9

35.5

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

0.24

1.6

69.73

41.4

Associated Gene:

Gene:

CLINT1

Ensembl Gene ID:

ENSAPLG00000013481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028391

11102903 - 11149797

46895

ENSAPLT00000022606

11113969 - 11149797

35829

ENSAPLT00000014098

11102903 - 11150220

47318

ENSAPLT00000044696

11102903 - 11149797

46895