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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11178138_11178699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11178138 - 11178699

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TGTTCGCTAATG

Flanking Amino Acid:

RKGTVLIWQKVNEVTTKKIK

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

68.5

0.46

75.3

29.8

Major PPT

80.9

0.7

0.8

77.5

35.1

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

49.3

-0.1

2.4

64.84

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014359

11177976 - 11181561

3586