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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11179478_11180227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11179478 - 11180227

Intron Length:

750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGCGTT

5'SS Class:

major

3'SS Sequence:

TATTTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATTTAGTAAACA

Flanking Amino Acid:

KDYLSWRQADCHINNLYNTV

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

69.5

41.3

Major BPS

73.8

0.59

1.3

72.8

Major PPT

85.3

0.79

0.7

81.2

30.6

Minor 5ss

45.2

-0.5

3.5

74.4

41.8

Minor BPS

48.5

-0.1

2.4

70.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014359

11177976 - 11181561

3586