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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11183795_11185200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11183795 - 11185200

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAACATT

5'SS Class:

major

3'SS Sequence:

TCATCTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTTCATCT

Flanking Amino Acid:

IKQRHREEFPGWVYQPRPGK

Intron Amino Acid Position:

449

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

76.9

38.1

Major BPS

100

1.24

0.5

100

Major PPT

72.5

0.51

68.6

37.1

Minor 5ss

44.8

-0.6

3.1

42.8

Minor BPS

54.8

0.23

1.8

75.13

42.3

Associated Gene:

Gene:

SOX30

Ensembl Gene ID:

ENSAPLG00000013850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014421

11181248 - 11188710

7463