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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11228801_11229253_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11228801 - 11229253

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATTCATG

5'SS Class:

weak_major

3'SS Sequence:

TTTTCCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTTTCCTTTCTA

Flanking Amino Acid:

SSIAPEDKPKTLA*

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.1

43.5

Major BPS

71.2

0.53

37.5

Major PPT

88.1

0.86

0.6

81.5

30.4

Minor 5ss

53.1

0.11

2.4

66.2

39.2

Minor BPS

47.4

-0.2

3.6

79.05

37.5

Associated Gene:

Gene:

NIPAL4

Ensembl Gene ID:

ENSAPLG00000014781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015411

11228366 - 11236667

8302