Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_11247390_11251105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11247390 - 11251105

Intron Length:

3716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCTTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TACATTGTCACT

Flanking Amino Acid:

PLIERLGTPQQIAIAREGDL

Intron Amino Acid Position:

1070

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

73.9

0.59

30.2

Major PPT

75.2

0.57

0.8

72.1

32.4

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

42.2

-0.5

2.3

60.48

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002773

11244243 - 11289229

44987