Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_11266019_11266483_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11266019 - 11266483

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TCCTCCCCATCT

Flanking Amino Acid:

PNYCYNGSTNRFVRTAIPFT

Intron Amino Acid Position:

862

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

61.3

0.28

52.7

34.2

Major PPT

62.7

0.29

0.9

54.5

35.2

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

47.2

-0.1

2.1

68.76

47.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002773

11244243 - 11289229

44987