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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11271239_11271612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11271239 - 11271612

Intron Length:

374

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TACATGTTAACT

Flanking Amino Acid:

RRAVGPSSTQLYMVRTMLES

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

66.6

0.37

66.8

26.9

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

54.4

0.22

2.1

73.25

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002773

11244243 - 11289229

44987