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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11274894_11277665_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11274894 - 11277665

Intron Length:

2772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTGCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CGTTCTTGAAGC

Flanking Amino Acid:

TSAHYEENKSKWTCTQSSIS

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

74.6

0.61

65.6

41.4

Major PPT

81.9

0.72

0.9

76.2

37.8

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

53.6

0.09

1.8

63.58

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002773

11244243 - 11289229

44987