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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11277758_11280427_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11277758 - 11280427

Intron Length:

2670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

CGCGTTTCAACC

Flanking Amino Acid:

NLSKIDKFFKQLQVVPLFGD

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

46.7

-0.2

1.6

49.9

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002773

11244243 - 11289229

44987