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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11338870_11342957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11338870 - 11342957

Intron Length:

4088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

CTCTGCTCAACA

Flanking Amino Acid:

THWRISPANLGPAVSELLVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

81.7

32.2

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

79.1

0.66

0.8

31.2

Minor 5ss

35.2

-1.7

3.5

49.1

47.1

Minor BPS

54.3

0.13

67.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004595

11338836 - 11348440

9605

ENSAPLT00000022308

11338836 - 11348440

9605

ENSAPLT00000004600

11338836 - 11348440

9605