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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11340996_11342957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11340996 - 11342957

Intron Length:

1962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

CTCTGCTCAACA

Flanking Amino Acid:

LNWILLTLLTGPAVSELLVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.1

77.9

38.6

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

79.1

0.66

0.8

31.2

Minor 5ss

40.6

-1

2.6

50.6

45.9

Minor BPS

54.3

0.13

67.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023902

11340793 - 11348440

7648

ENSAPLT00000046658

11340793 - 11348440

7648