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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11343942_11345899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11343942 - 11345899

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

GTGACAGTGATG

Flanking Amino Acid:

PHTYTSTQTSAPGSASEASF

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

76.7

0.6

0.9

76.1

37.8

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

40.5

-0.8

2.2

44.83

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023902

11340793 - 11348440

7648

ENSAPLT00000004600

11338836 - 11348440

9605

ENSAPLT00000004595

11338836 - 11348440

9605

ENSAPLT00000046658

11340793 - 11348440

7648