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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11356360_11413559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11356360 - 11413559

Intron Length:

57200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

ELKLESKDGEVSSTHSLTLS

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

SGCD

Ensembl Gene ID:

ENSAPLG00000004614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025112

11345967 - 11616036

270070

ENSAPLT00000029897

11356135 - 11616036

259902