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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11386497_11413559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11386497 - 11413559

Intron Length:

27063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGCTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

AACTCCTTAACC

Flanking Amino Acid:

ELKLESKDGEQSIQDADEES

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

64.7

0.37

31.5

Major PPT

77.6

0.62

0.8

69.5

36.8

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

80.4

0.93

1.1

78.23

37.1

Associated Gene:

Gene:

SGCD

Ensembl Gene ID:

ENSAPLG00000004614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031552

11386188 - 11616036

229849