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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11459919_11462297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11459919 - 11462297

Intron Length:

2379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTATGCTAAATC

Flanking Amino Acid:

KTKVLTRLVTGPQAVEAHSQ

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

84.2

0.77

0.7

77.7

31.2

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

55.8

0.16

2.1

70.78

41.1

Associated Gene:

Gene:

SGCD

Ensembl Gene ID:

ENSAPLG00000004614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029897

11356135 - 11616036

259902

ENSAPLT00000029830

11410716 - 11616036

205321

ENSAPLT00000025112

11345967 - 11616036

270070

ENSAPLT00000004761

11405109 - 11540314

135206

ENSAPLT00000031552

11386188 - 11616036

229849