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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11485973_11540128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11485973 - 11540128

Intron Length:

54156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

GTATGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGTAACTAATG

Flanking Amino Acid:

WILKVMNFTIDGMGNLRITD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

76.5

38.6

Major BPS

77.9

0.69

0.8

75.9

Major PPT

69.3

0.43

45.1

Minor 5ss

-1.1

2.9

57.4

41.1

Minor BPS

46.4

-0.4

2.1

58.47

Associated Gene:

Gene:

SGCD

Ensembl Gene ID:

ENSAPLG00000004614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029897

11356135 - 11616036

259902

ENSAPLT00000029830

11410716 - 11616036

205321

ENSAPLT00000025112

11345967 - 11616036

270070

ENSAPLT00000004761

11405109 - 11540314

135206

ENSAPLT00000031552

11386188 - 11616036

229849