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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11540315_11615857_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11540315 - 11615857

Intron Length:

75543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

GTGATTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTCTTGTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.2

0.52

69.3

45.9

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

49.7

0.06

75.19

36.2

Associated Gene:

Gene:

SGCD

Ensembl Gene ID:

ENSAPLG00000004614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029897

11356135 - 11616036

259902

ENSAPLT00000029830

11410716 - 11616036

205321

ENSAPLT00000025112

11345967 - 11616036

270070

ENSAPLT00000031552

11386188 - 11616036

229849