Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_11956352_11956914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11956352 - 11956914

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCTC

5'SS Class:

major

3'SS Sequence:

TCTGGTTCATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

TCTTGAGTAATT

Flanking Amino Acid:

VSACYDGTAQVWDVMKEEPL

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

60.6

0.24

1.1

65.1

40.4

Minor 5ss

41.5

-0.9

3.3

59.2

45.5

Minor BPS

46.1

-0.2

2.5

72.41

Associated Gene:

Gene:

GEMIN5

Ensembl Gene ID:

ENSAPLG00000006816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007100

11947764 - 11966978

19215