Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_11957087_11957340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11957087 - 11957340

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTGACCTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTTGTGACCT

Flanking Amino Acid:

SKQEHTRPPQGKKSIELEKK

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

68.8

0.42

0.9

61.5

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

49.3

0.03

2.4

80.07

42.1

Associated Gene:

Gene:

GEMIN5

Ensembl Gene ID:

ENSAPLG00000006816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007100

11947764 - 11966978

19215