Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_11969492_11969809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11969492 - 11969809

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGCGT

5'SS Class:

major

3'SS Sequence:

CTCCCCTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

TGMAFFRMKELFFEDTIDDA

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

57.1

47.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

78.7

0.65

0.7

72.6

25.6

Minor 5ss

31.1

-2.2

3.6

47.7

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

CNOT8

Ensembl Gene ID:

ENSAPLG00000007128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007408

11968632 - 11974542

5911