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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11971104_11971776_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11971104 - 11971776

Intron Length:

673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAAAA

Flanking Amino Acid:

TWQFNFKFNLTEDMYSQDSI

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

91.1

0.92

0.6

89.5

19.1

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

70.4

0.64

1.5

81.5

Associated Gene:

Gene:

CNOT8

Ensembl Gene ID:

ENSAPLG00000007128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007408

11968632 - 11974542

5911