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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11971971_11973161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11971971 - 11973161

Intron Length:

1191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTACCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTTTCTTACCC

Flanking Amino Acid:

IVLSYSYIAMDTEFPGVVVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

80.3

32.2

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

83.3

0.75

0.8

77.5

35.9

Minor 5ss

38.1

-1.3

3.5

54.6

Minor BPS

69.3

0.59

1.6

77.35

39.1

Associated Gene:

Gene:

CNOT8

Ensembl Gene ID:

ENSAPLG00000007128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007408

11968632 - 11974542

5911