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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11973364_11973864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11973364 - 11973864

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGCG

5'SS Class:

major

3'SS Sequence:

TCTTCCTATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTCTTCCTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.8

0.65

0.8

29.6

Minor 5ss

33.7

-1.9

3.8

47.1

48.5

Minor BPS

53.3

0.18

1.9

75.75

41.6

Associated Gene:

Gene:

CNOT8

Ensembl Gene ID:

ENSAPLG00000007128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007408

11968632 - 11974542

5911