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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11976968_11979712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11976968 - 11979712

Intron Length:

2745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

GCTCCTATGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

85.1

0.79

0.9

83.9

31.1

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

46.7

-0.4

1.6

49.3

38.8

Associated Gene:

Gene:

FAXDC2

Ensembl Gene ID:

ENSAPLG00000007416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007692

11976652 - 11988053

11402