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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11984198_11984527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11984198 - 11984527

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATAGCCTCAAAT

Flanking Amino Acid:

YRIQLGKNDPVDTKKLRQAI

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

94.9

1.01

0.5

91.6

19.6

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

56.3

0.28

1.8

73.32

42.8

Associated Gene:

Gene:

FAXDC2

Ensembl Gene ID:

ENSAPLG00000007416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007692

11976652 - 11988053

11402