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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11986733_11987896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11986733 - 11987896

Intron Length:

1164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTCCC

5'SS Class:

major

3'SS Sequence:

GTTTGGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGCTGTTTATTC

Flanking Amino Acid:

SPEFHDFHHLKFNQCYGVLG

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

64.5

38.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.65

69.2

46.1

Minor 5ss

35.8

-1.6

3.2

45.4

36.5

Minor BPS

47.7

-0.1

58.07

41.8

Associated Gene:

Gene:

FAXDC2

Ensembl Gene ID:

ENSAPLG00000007416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007692

11976652 - 11988053

11402