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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11994604_11995650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11994604 - 11995650

Intron Length:

1047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

GCTTCCATTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

GGTGCTTCCATT

Flanking Amino Acid:

FKRLEDFRVDPPMGEEGGHK

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.3

74.1

38.4

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

76.2

0.59

0.9

66.4

39.4

Minor 5ss

-2.2

2.6

32.5

Minor BPS

44.8

-0.3

61.2

43.2

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517