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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11995779_11996238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11995779 - 11996238

Intron Length:

460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CCTGGTTTGATT

Flanking Amino Acid:

QEETIKDYEAGQLYGLEKFW

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.6

0.69

0.7

77.3

24.7

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

47.3

-0.1

1.9

61.34

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517