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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11996635_11996907_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11996635 - 11996907

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGTG

5'SS Class:

major

3'SS Sequence:

CTCCCCGAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCCCCGAAAC

Flanking Amino Acid:

YHKYRRRCLNERKRLGIGQS

Intron Amino Acid Position:

874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

67.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

59.4

0.21

34.3

Minor 5ss

35.4

-1.7

3.6

47.2

Minor BPS

48.4

-0.1

1.9

63.36

41.2

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517