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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12000905_12001125_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12000905 - 12001125

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CACTTCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CTTGAATTAACT

Flanking Amino Acid:

LTTDISLIIKALKDSKVVEI

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

79.4

0.66

0.8

31.4

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

57.3

0.31

1.9

78.09

43.9

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517