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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12001665_12002421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12001665 - 12002421

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTGCT

5'SS Class:

major

3'SS Sequence:

TGCTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGTGCTGACAA

Flanking Amino Acid:

RGRGRGRGRGAHFDYQYGYR

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

71.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.72

0.9

76.2

37.8

Minor 5ss

34.3

-1.8

3.4

45.4

Minor BPS

42.5

-0.5

2.1

52.96

45.1

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517