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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12004729_12005971_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12004729 - 12005971

Intron Length:

1243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGATACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTCTTTGGATA

Flanking Amino Acid:

ANPRQRKGSKVGDFGDATNW

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

56.4

0.15

1.2

54.2

43.9

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

53.8

0.11

1.4

67.51

32.3

Associated Gene:

Gene:

LARP1

Ensembl Gene ID:

ENSAPLG00000007559

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007862

11993260 - 12031776

38517