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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12085944_12087923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12085944 - 12087923

Intron Length:

1980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTCCGAATT

Flanking Amino Acid:

PGLNKAQLAETVSRHFRNIP

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.6

0.64

0.8

70.3

36.4

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

53.2

0.18

1.7

73.21

37.3

Associated Gene:

Gene:

SAP30L

Ensembl Gene ID:

ENSAPLG00000020905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019644

12083570 - 12091465

7896