Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_12101079_12101796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12101079 - 12101796

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TTCTCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

CTCACCTGAAAT

Flanking Amino Acid:

KGNQLWRYRRDKTLYHPVSS

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

40.1

Major BPS

60.8

0.27

51.3

35.5

Major PPT

87.9

0.85

0.7

80.8

31.3

Minor 5ss

32.1

-2

3.3

36.6

41.6

Minor BPS

56.2

0.27

1.7

71.04

45.2

Associated Gene:

Gene:

GALNT10

Ensembl Gene ID:

ENSAPLG00000007938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046407

12099911 - 12140470

40560

ENSAPLT00000008263

12100911 - 12185537

84627