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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12200839_12201117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12200839 - 12201117

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

AATTTTCTACCT

Flanking Amino Acid:

ISSETRDATRGGENSDDNSA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.2

87.9

29.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

82.6

0.73

0.8

Minor 5ss

41.5

-0.9

2.9

58.8

45.7

Minor BPS

49.6

0.05

1.9

71.61

39.4

Associated Gene:

Gene:

FAM114A2

Ensembl Gene ID:

ENSAPLG00000008179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037774

12199749 - 12214502

14754

ENSAPLT00000008532

12199494 - 12208593

9100