Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_12202618_12203227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12202618 - 12203227

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGCC

5'SS Class:

major

3'SS Sequence:

TGCCCCTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACGAT

U12 Branch Point Sequence:

CTGCCCCTAATT

Flanking Amino Acid:

EMLSKESESKVKLVLSALSG

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

69.1

37.5

Major BPS

0.3

1.4

60.8

45.4

Major PPT

60.3

0.23

0.9

59.6

35.8

Minor 5ss

30.6

-2.2

3.5

42.3

44.6

Minor BPS

0.36

1.7

74.05

Associated Gene:

Gene:

FAM114A2

Ensembl Gene ID:

ENSAPLG00000008179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037774

12199749 - 12214502

14754

ENSAPLT00000008532

12199494 - 12208593

9100