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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12225673_12228884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12225673 - 12228884

Intron Length:

3212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

GAGCTCATGACA

Flanking Amino Acid:

LGMAQKGVELAPDDISLRRC

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

87.4

0.84

0.7

80.6

31.4

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

47.7

-0.1

1.6

54.24

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046249

12225303 - 12235098

9796

ENSAPLT00000040554

12225303 - 12235862

10560

ENSAPLT00000008758

12225303 - 12235862

10560