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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12229631_12230177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12229631 - 12230177

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TGAGCCCCATTT

Flanking Amino Acid:

FQPAQSEMEKILAQEDAARP

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

64.9

41.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

85.8

0.81

0.6

81.6

23.2

Minor 5ss

32.7

-2

3.1

40.1

Minor BPS

41.8

-0.5

58.75

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046249

12225303 - 12235098

9796

ENSAPLT00000008758

12225303 - 12235862

10560