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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12232632_12233237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12232632 - 12233237

Intron Length:

606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAA

U12 Branch Point Sequence:

TCTTGTCCAACC

Flanking Amino Acid:

CPLCKQSLREYLKAGSYSCT

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

52.9

0.07

1.4

64.5

42.8

Major PPT

89.1

0.88

0.6

88.3

21.5

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

-0.3

2.2

62.86

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046249

12225303 - 12235098

9796

ENSAPLT00000040554

12225303 - 12235862

10560

ENSAPLT00000008758

12225303 - 12235862

10560