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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12233360_12233583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12233360 - 12233583

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATCAC

U12 Branch Point Sequence:

GGTATCACAGCA

Flanking Amino Acid:

LHQAEMAELSNLTKNIPIFV

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.6

41.3

Major BPS

60.6

0.26

1.3

65.7

Major PPT

83.2

0.75

0.6

81.8

23.1

Minor 5ss

31.5

-2.1

3.4

38.7

40.8

Minor BPS

41.3

-0.6

1.9

51.24

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008439

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040554

12225303 - 12235862

10560

ENSAPLT00000008758

12225303 - 12235862

10560

ENSAPLT00000046249

12225303 - 12235098

9796