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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12263910_12266268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12263910 - 12266268

Intron Length:

2359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCAACC

5'SS Class:

major

3'SS Sequence:

CTTTCCTAAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAA

U12 Branch Point Sequence:

CTTTCCTAAAAA

Flanking Amino Acid:

KSRSESKRMKGFCLIPQQSI

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.2

59.5

39.8

Major BPS

59.6

0.24

1.3

58.7

39.9

Major PPT

62.3

0.28

1.1

64.8

34.5

Minor 5ss

33.4

-1.9

3.1

43.9

43.5

Minor BPS

65.7

0.49

1.8

76.43

40.8

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019166

12263697 - 12384377

120681

ENSAPLT00000018207

12263697 - 12384377

120681

ENSAPLT00000040467

12263697 - 12421219

157523

ENSAPLT00000008964

12263697 - 12421219

157523

ENSAPLT00000035425

12263697 - 12396174

132478

ENSAPLT00000031091

12263697 - 12384377

120681