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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12266404_12272958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12266404 - 12272958

Intron Length:

6555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCAC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTCTCCTTTCTC

Flanking Amino Acid:

ECGSKDSGSKDKTSALSLSN

Intron Amino Acid Position:

750

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.3

72.3

39.5

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

29.9

-2.3

2.7

35.6

Minor BPS

44.5

-0.4

3.6

70.11

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018207

12263697 - 12384377

120681

ENSAPLT00000040467

12263697 - 12421219

157523

ENSAPLT00000035425

12263697 - 12396174

132478

ENSAPLT00000031091

12263697 - 12384377

120681

ENSAPLT00000019166

12263697 - 12384377

120681