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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12266404_12273756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12266404 - 12273756

Intron Length:

7353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCCCC

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTCTCCTTTCTC

Flanking Amino Acid:

ECGSGGGDSKDKTSALSLSN

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

34.6

-1.8

2.9

43.6

Minor BPS

44.5

-0.4

3.6

70.11

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008964

12263697 - 12421219

157523