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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12273074_12278792_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12273074 - 12278792

Intron Length:

5719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGGTTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTATGTTATTT

Flanking Amino Acid:

GIATPKGSALRGPVNLAVLK

Intron Amino Acid Position:

711

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

88.7

0.96

0.8

36.5

Major PPT

59.1

0.21

1.1

58.1

36.3

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

49.1

0.01

2.3

75.79

41.6

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035425

12263697 - 12396174

132478

ENSAPLT00000031091

12263697 - 12384377

120681

ENSAPLT00000019166

12263697 - 12384377

120681

ENSAPLT00000018207

12263697 - 12384377

120681

ENSAPLT00000040467

12263697 - 12421219

157523