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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12273872_12278792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12273872 - 12278792

Intron Length:

4921

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTCATTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCATTTTAAAG

Flanking Amino Acid:

GIATPKGSALRNPVNLAVLK

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

71.6

0.49

1.1

71.2

37.9

Minor 5ss

36.1

-1.6

2.7

45.8

42.3

Minor BPS

0.08

1.5

60.51

41.6

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008964

12263697 - 12421219

157523