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Intron Name: Anas_platyrhynchos_platyrhynchos_14_12382032_12420791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12382032 - 12420791

Intron Length:

38760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTTAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GTGCTCAGACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

71.4

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

87.9

0.85

0.6

81.4

30.6

Minor 5ss

47.1

-0.3

2.5

61.4

43.6

Minor BPS

42.8

-0.4

1.9

59.86

Associated Gene:

Gene:

GRIA1

Ensembl Gene ID:

ENSAPLG00000008617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040467

12263697 - 12421219

157523

ENSAPLT00000008964

12263697 - 12421219

157523