Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_12661377_12666031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12661377 - 12666031

Intron Length:

4655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CTCCTTTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

TCCTATCTAAGC

Flanking Amino Acid:

SVLYYLMGLRLKGDKSLEVE

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

69.1

41.8

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

0.61

0.9

71.8

38.1

Minor 5ss

38.1

-1.3

48.4

41.1

Minor BPS

44.8

-0.4

2.1

55.21

43.3

Associated Gene:

Gene:

NMUR2

Ensembl Gene ID:

ENSAPLG00000008762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009110

12660657 - 12668353

7697